BD                  package:funfits                  R Documentation

_D_a_t_a _f_r_a_m_e _o_f _t_h_e _e_f_f_e_c_t _o_f _b_u_f_f_e_r _c_o_m_p_o_s_i_t_i_o_n_s _o_n _D_N_A _s_t_r_a_n_d _d_i_s_p_l_a_c_e_m_e_n_t
_a_m_p_l_i_f_i_c_a_t_i_o_n.

_A_r_g_u_m_e_n_t_s:

     KCl: Buffer component. 

   MgCl2: Buffer component. 

    KPO4: Buffer component. 

    dNTP: Buffer component, deoxyribonucleotides. 

    lnya: Exponential amplification rate on a log scale, i.e. the
          actual amplification rate. 

_S_U_M_M_A_R_Y:

     The `BD' data frame has 89 rows and 5 columns. There are 89 runs
     with  four buffer components (KCL, MgCl2, KP04, dnTP)
     systematically varied in a space-filliing design. The response is
     the DNA amplification rate.

"_D_A_T_A:

     This data frame contains the following columns:

_S_O_U_R_C_E:

     Becton Dickinson Research Center Research Triangle Park, NC

_S_e_e _A_l_s_o:

     tps, krig, nnreg, optim

_E_x_a_m_p_l_e_s:

     tps(BD[,1:4],BD$lnya,scale.type="range") -> fit # fitting a DNA strand
     # displacement amplification  surface to various buffer compositions
     surface(fit)  # plots fitted surface and contours

