Entry: Cramer
Aliases: pcramer
Keywords: distribution
Description: The Cramer-von Mises Distribution
URL: ../../../library/coda/html/Cramer.html

Entry: as.ts.mcmc
Aliases: as.ts.msms
Keywords: ts utilities
Description: Coerce mcmc object to time series
URL: ../../../library/coda/html/as.ts.mcmc.html

Entry: autocorr
Aliases: autocorr
Keywords: ts
Description: Autocorrelation function for Markov chains
URL: ../../../library/coda/html/autocorr.html

Entry: autocorr.plot
Aliases: autocorr.plot
Keywords: hplot
Description: Plot autocorrelations for Markov Chains
URL: ../../../library/coda/html/autocorr.plot.html

Entry: codamenu
Aliases: codamenu
Keywords: util
Description: Main menu driver for the coda package
URL: ../../../library/coda/html/codamenu.html

Entry: crosscorr
Aliases: crosscorr
Keywords: multivariate array
Description: Cross correlations for MCMC output
URL: ../../../library/coda/html/crosscorr.html

Entry: crosscorr.plot
Aliases: crosscorr.plot
Keywords: hplot
Description: Plot image of correlation matrix
URL: ../../../library/coda/html/crosscorr.plot.html

Entry: densplot
Aliases: densplot
Keywords: hplot
Description: Probability density function estimate from MCMC output
URL: ../../../library/coda/html/densplot.html

Entry: gelman.diag
Aliases: gelman.diag
Keywords: htest
Description: Gelman and Rubin's convergence diagnostic
URL: ../../../library/coda/html/gelman.diag.html

Entry: gelman.plot
Aliases: gelman.plot
Keywords: hplot
Description: Gelman-Rubin-Brooks plot
URL: ../../../library/coda/html/gelman.plot.html

Entry: geweke.diag
Aliases: geweke.diag
Keywords: htest
Description: Geweke's convergence diagnostic
URL: ../../../library/coda/html/geweke.diag.html

Entry: geweke.plot
Aliases: geweke.plot
Keywords: hplot
Description: Geweke-Brooks plot
URL: ../../../library/coda/html/geweke.plot.html

Entry: heidel.diag
Aliases: heidel.diag
Keywords: htest
Description: Heidelberger and Welch's convergence diagnostic
URL: ../../../library/coda/html/heidel.diag.html

Entry: mcmc
Aliases: mcmc as.mcmc is.mcmc
Keywords: ts
Description: Markov Chain Monte Carlo Objects
URL: ../../../library/coda/html/mcmc.html

Entry: mcmc.list
Aliases: mcmc.list as.mcmc.list is.mcmc.list
Keywords: ts
Description: Replicated Markov Chain Monte Carlo Objects
URL: ../../../library/coda/html/mcmc.list.html

Entry: multi.menu
Aliases: multi.menu
Keywords: utilities
Description: Choose multiple options from a menu
URL: ../../../library/coda/html/multi.menu.html

Entry: plot.mcmc
Aliases: plot.mcmc
Keywords: hplot
Description: Summary plots of mcmc objects
URL: ../../../library/coda/html/plot.mcmc.html

Entry: raftery.diag
Aliases: raftery.diag
Keywords: htest
Description: Raftery and Lewis's diagnostic
URL: ../../../library/coda/html/raftery.diag.html

Entry: read.and.check
Aliases: read.and.check
Keywords: utilities
Description: Read data interactively and check that it satisfies conditions
URL: ../../../library/coda/html/read.and.check.html

Entry: read.bugs
Aliases: read.bugs
Keywords: file
Description: Read BUGS output files
URL: ../../../library/coda/html/read.bugs.html

Entry: read.bugs.interactive
Aliases: read.bugs.interactive
Keywords: files
Description: Read BUGS output files interactively
URL: ../../../library/coda/html/read.bugs.interactive.html

Entry: spectrum0
Aliases: spectrum0
Keywords: ts
Description: Estimate spectral density at zero
URL: ../../../library/coda/html/spectrum0.html

Entry: summary.mcmc
Aliases: summary.mcmc summary.mcmc.list
Keywords: univar
Description: Summary statistics for  Markov Chain Monte Carlo chains
URL: ../../../library/coda/html/summary.mcmc.html

Entry: thin
Aliases: thin
Keywords: ts
Description: Thinning interval
URL: ../../../library/coda/html/thin.html

Entry: traceplot
Aliases: traceplot
Keywords: hplot
Description: Trace plot of MCMC output
URL: ../../../library/coda/html/traceplot.html

Entry: upgrade.mcmc
Aliases: upgrade.mcmc
Keywords: ts
Description: Upgrade mcmc objects in obsolete format
URL: ../../../library/coda/html/upgrade.mcmc.html

Entry: window.mcmc
Aliases: window.mcmc
Keywords: ts
Description: Time windows for mcmc objects
URL: ../../../library/coda/html/window.mcmc.html

